CRAN Package Check Results for Package dendextend

Last updated on 2018-01-18 22:47:20 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6.0 5.34 313.59 318.93 NOTE
r-devel-linux-x86_64-debian-gcc 1.6.0 5.08 264.62 269.70 NOTE
r-devel-linux-x86_64-fedora-clang 1.6.0 394.93 NOTE
r-devel-linux-x86_64-fedora-gcc 1.6.0 407.22 NOTE
r-devel-windows-ix86+x86_64 1.6.0 14.00 286.00 300.00 OK
r-patched-linux-x86_64 1.6.0 5.68 359.67 365.35 NOTE
r-patched-solaris-x86 1.6.0 476.40 WARN
r-release-linux-x86_64 1.6.0 5.98 357.34 363.32 NOTE
r-release-windows-ix86+x86_64 1.6.0 14.00 318.00 332.00 OK
r-release-osx-x86_64 1.6.0 WARN
r-oldrel-windows-ix86+x86_64 1.6.0 13.00 401.00 414.00 OK
r-oldrel-osx-x86_64 1.6.0 WARN

Check Details

Version: 1.6.0
Check: package dependencies
Result: NOTE
    Package which this enhances but not available for checking: ‘labeltodendro’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.6.0
Check: Rd cross-references
Result: NOTE
    Packages unavailable to check Rd xrefs: ‘WGCNA’, ‘moduleColor’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-osx-x86_64

Version: 1.6.0
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    ---------------------
    Welcome to dendextend version 1.6.0
    Type citation('dendextend') for how to cite the package.
    
    Type browseVignettes(package = 'dendextend') for the package vignette.
    The github page is: https://github.com/talgalili/dendextend/
    
    Suggestions and bug-reports can be submitted at: https://github.com/talgalili/dendextend/issues
    Or contact: <tal.galili@gmail.com>
    
     To suppress this message use: suppressPackageStartupMessages(library(dendextend))
    ---------------------
    
    
    Attaching package: 'dendextend'
    
    The following object is masked from 'package:stats':
    
     cutree
    
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'gplots'
    
    The following objects are masked from 'package:seriation':
    
     bluered, greenred
    
    The following object is masked from 'package:stats':
    
     lowess
    
    Loading required package: pkgmaker
    Loading required package: registry
    
    Attaching package: 'pkgmaker'
    
    The following object is masked from 'package:base':
    
     isNamespaceLoaded
    
    Loading required package: rngtools
    # NOTE - CRAN check detected: limiting maximum number of cores [2/16]
    NMF - BioConductor layer [OK] | Shared memory capabilities [OK] | Cores 2/2 | CRAN check
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 925-927 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.6.0
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    The following objects are masked from 'package:seriation':
    
     bluered, greenred
    
    The following object is masked from 'package:stats':
    
     lowess
    
    Loading required package: pkgmaker
    Loading required package: registry
    
    Attaching package: 'pkgmaker'
    
    The following object is masked from 'package:base':
    
     isNamespaceLoaded
    
    Loading required package: rngtools
    # NOTE - CRAN check detected: limiting maximum number of cores [2/8]
    NMF - BioConductor layer [OK] | Shared memory capabilities [OK] | Cores 2/2 | CRAN check
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 925-927 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-release-osx-x86_64

Version: 1.6.0
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    The following objects are masked from 'package:seriation':
    
     bluered, greenred
    
    The following object is masked from 'package:stats':
    
     lowess
    
    Loading required package: pkgmaker
    Loading required package: registry
    
    Attaching package: 'pkgmaker'
    
    The following object is masked from 'package:base':
    
     isNamespaceLoaded
    
    Loading required package: rngtools
    # NOTE - CRAN check detected: limiting maximum number of cores [2/16]
    NMF - BioConductor layer [OK] | Shared memory capabilities [OK] | Cores 2/2 | CRAN check
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 925-927 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-oldrel-osx-x86_64