CRAN Package Check Results for Package ifaTools

Last updated on 2019-09-14 22:48:27 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.19 10.69 172.06 182.75 OK
r-devel-linux-x86_64-debian-gcc 0.19 9.34 142.89 152.23 OK
r-devel-linux-x86_64-fedora-clang 0.19 203.42 OK
r-devel-linux-x86_64-fedora-gcc 0.19 210.24 OK
r-devel-windows-ix86+x86_64 0.19 42.00 231.00 273.00 OK
r-patched-linux-x86_64 0.19 9.79 161.18 170.97 OK
r-patched-solaris-x86 0.19 531.90 ERROR
r-release-linux-x86_64 0.19 9.33 176.40 185.73 OK
r-release-windows-ix86+x86_64 0.19 20.00 178.00 198.00 OK
r-release-osx-x86_64 0.19 OK
r-oldrel-windows-ix86+x86_64 0.19 24.00 170.00 194.00 WARN
r-oldrel-osx-x86_64 0.19 OK

Check Details

Version: 0.19
Check: examples
Result: ERROR
    Running examples in ‘ifaTools-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: univariatePrior
    > ### Title: Univariate priors commonly used in IFA models
    > ### Aliases: univariatePrior
    >
    > ### ** Examples
    >
    > model <- univariatePrior("logit-norm", "x1", -1)
    > model$priorParam$values[1,1] <- -.6
    > model <- mxRun(model)
    Running univariatePrior with 1 parameter
    Error: C stack usage 228955284 is too close to the limit
    Error: The job for model 'univariatePrior' exited abnormally with the error message: User interrupt
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.19
Check: tests
Result: ERROR
     Running ‘testthat.R’ [333s/285s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > # NOTE: This will not test an uninstalled package.
     > library(testthat)
     > test_check('ifaTools')
     Loading required package: ifaTools
     Loading required package: shiny
     Loading required package: ggplot2
     Loading required package: reshape2
     Loading required package: rpf
     Loading required package: parallel
     Loading required package: OpenMx
     To take full advantage of multiple cores, use:
     mxOption(key='Number of Threads', value=parallel::detectCores()) #now
     Sys.setenv(OMP_NUM_THREADS=parallel::detectCores()) #before library(OpenMx)
     Welcome to ifaTools!
     Use itemModelExplorer() to explore item models.
     Use modelBuilder() to build an IFA model.
     [1] "/home/ripley/R/packages/tests32/ifaTools.Rcheck/tests/testthat"
     ── 1. Failure: addExploratoryFactors (@test-addExploratoryFactor.R#80) ────────
     m1$output$fit - m2$output$fit not equal to 115.39.
     1/1 mismatches
     [1] -1435708 - 115 == -1435824
    
     Error: C stack usage 239899796 is too close to the limit
     ── 2. Error: univariatePrior (@test-prior.R#24) ───────────────────────────────
     The job for model 'univariatePrior' exited abnormally with the error message: User interrupt
     1: checkAnalyticDeriv(mxModel(univariatePrior("lnorm", "x", 1.1), mxMatrix(nrow = 1,
     ncol = 1, labels = "x", free = TRUE, name = "par", values = 0.3))) at testthat/test-prior.R:24
     2: mxRun(mxModel(m1, mxComputeSequence(list(mxComputeNumericDeriv(checkGradient = FALSE),
     mxComputeReportDeriv()))), silent = TRUE) at testthat/test-prior.R:10
     3: runHelper(model, frontendStart, intervals, silent, suppressWarnings, unsafe, checkpoint,
     useSocket, onlyFrontend, useOptimizer, beginMessage)
     4: processErrorConditions(model, unsafe, suppressWarnings)
     5: stop(paste("The job for model", omxQuotes(model@name), "exited abnormally with the error message:",
     output$error), call. = FALSE)
    
     Error: C stack usage 239899796 is too close to the limit
     ── 3. Error: uniquenessPrior (@test-prior.R#54) ───────────────────────────────
     The job for model 'test' exited abnormally with the error message: User interrupt
     1: checkAnalyticDeriv(omxAssignFirstParameters(m1)) at testthat/test-prior.R:54
     2: mxRun(mxModel(m1, mxComputeSequence(list(mxComputeNumericDeriv(checkGradient = FALSE),
     mxComputeReportDeriv()))), silent = TRUE) at testthat/test-prior.R:10
     3: runHelper(model, frontendStart, intervals, silent, suppressWarnings, unsafe, checkpoint,
     useSocket, onlyFrontend, useOptimizer, beginMessage)
     4: processErrorConditions(model, unsafe, suppressWarnings)
     5: stop(paste("The job for model", omxQuotes(model@name), "exited abnormally with the error message:",
     output$error), call. = FALSE)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 0 | SKIPPED: 0 | WARNINGS: 2 | FAILED: 3 ]
     1. Failure: addExploratoryFactors (@test-addExploratoryFactor.R#80)
     2. Error: univariatePrior (@test-prior.R#24)
     3. Error: uniquenessPrior (@test-prior.R#54)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86

Version: 0.19
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘pritikin-schmidt.Rnw’ using knitr
    Quitting from lines 1344-1399 (pritikin-schmidt.Rnw)
    Error: processing vignette 'pritikin-schmidt.Rnw' failed with diagnostics:
    Fit not achieved
    --- failed re-building ‘pritikin-schmidt.Rnw’
    
    SUMMARY: processing the following file failed:
     ‘pritikin-schmidt.Rnw’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.19
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: S3 methods '[.fun_list', '[.grouped_df', 'all.equal.tbl_df', 'anti_join.data.frame', 'anti_join.tbl_df', 'arrange.data.frame', 'arrange.default', 'arrange.grouped_df', 'arrange.tbl_df', 'arrange_.data.frame', 'arrange_.tbl_df', 'as.data.frame.grouped_df', 'as.data.frame.rowwise_df', 'as.data.frame.tbl_cube', 'as.table.tbl_cube', 'as.tbl.data.frame', 'as.tbl.tbl', 'as.tbl_cube.array', 'as.tbl_cube.data.frame', 'as.tbl_cube.matrix', 'as.tbl_cube.table', 'as_tibble.grouped_df', 'as_tibble.tbl_cube', 'auto_copy.tbl_cube', 'auto_copy.tbl_df', 'cbind.grouped_df', 'collapse.data.frame', 'collect.data.frame', 'common_by.NULL', 'common_by.character', 'common_by.default', 'common_by.list', 'compute.data.frame', 'copy_to.DBIConnection', 'copy_to.src_local', 'default_missing.data.frame', 'default_missing.default', 'dim.tbl_cube', 'distinct.data.frame', 'distinct.default', 'distinct.grouped_df', 'distinct.tbl_df', 'distinct_.data.frame', 'distinct_.grouped_df', 'distinct_.tbl_df', 'do.NULL', 'do.da [... truncated]
Flavor: r-oldrel-windows-ix86+x86_64