Last updated on 2019-12-10 22:49:41 CET.

Flavor | Version | T_{install} | T_{check} | T_{total} | Status | Flags |
---|---|---|---|---|---|---|

r-devel-linux-x86_64-debian-clang | 0.5.0 | 8.20 | 209.66 | 217.86 | OK | |

r-devel-linux-x86_64-debian-gcc | 0.5.0 | 6.65 | 154.89 | 161.54 | OK | |

r-devel-linux-x86_64-fedora-clang | 0.5.0 | 255.55 | OK | |||

r-devel-linux-x86_64-fedora-gcc | 0.5.0 | 256.09 | OK | |||

r-devel-windows-ix86+x86_64 | 0.5.0 | 14.00 | 261.00 | 275.00 | OK | |

r-devel-windows-ix86+x86_64-gcc8 | 0.5.0 | 14.00 | 254.00 | 268.00 | OK | |

r-patched-linux-x86_64 | 0.5.0 | 7.71 | 196.35 | 204.06 | OK | |

r-patched-solaris-x86 | 0.5.0 | 265.40 | ERROR | |||

r-release-linux-x86_64 | 0.5.0 | 7.36 | 197.14 | 204.50 | OK | |

r-release-windows-ix86+x86_64 | 0.5.0 | 14.00 | 192.00 | 206.00 | OK | |

r-release-osx-x86_64 | 0.5.0 | OK | ||||

r-oldrel-windows-ix86+x86_64 | 0.5.0 | 12.00 | 187.00 | 199.00 | OK | |

r-oldrel-osx-x86_64 | 0.5.0 | OK |

Version: 0.5.0

Check: examples

Result: ERROR

Running examples in ‘pact-Ex.R’ failed

The error most likely occurred in:

> ### Name: print.eval.cv

> ### Title: Print an object of class 'eval.cv'

> ### Aliases: print.eval.cv

>

> ### ** Examples

>

> data(prostateCancer)

> Y <- prostateCancer[,3:4]

> Xf <- prostateCancer[,7:8]

> Xv <- prostateCancer[,c(5:6,9)]

> Treatment <- as.factor(prostateCancer[,2])

> p <- pact.fit(Y=Y, Xf=Xf, Xv=Xv, Treatment=Treatment, family="cox", varSelect="lasso")

Variable selection: lasso...

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

> cv <- pact.cv(p, nfold=5)

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned

Warning in getcoef(fit, nvars, nx, vnames) :

an empty model has been returned; probably a convergence issue

> eval <- eval.pact.cv(cv, method="discrete", g=log(0.80))

Error in survdiff.fit(y, groups, strata.keep, rho) :

There is only 1 group

Calls: eval.pact.cv ... .eval.pact.cv.survival.discrete -> survdiff -> survdiff.fit

Execution halted

Flavor: r-patched-solaris-x86