CRAN Package Check Results for Package ppls

Last updated on 2018-07-17 22:50:50 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6-1 1.52 24.20 25.72 ERROR
r-devel-linux-x86_64-debian-gcc 1.6-1 1.25 19.45 20.70 ERROR
r-devel-linux-x86_64-fedora-clang 1.6-1 30.63 NOTE
r-devel-linux-x86_64-fedora-gcc 1.6-1 29.17 NOTE
r-devel-windows-ix86+x86_64 1.6-1 6.00 56.00 62.00 NOTE
r-patched-linux-x86_64 1.6-1 1.70 23.71 25.41 ERROR
r-patched-solaris-x86 1.6-1 47.40 NOTE
r-release-linux-x86_64 1.6-1 1.62 23.35 24.97 ERROR
r-release-windows-ix86+x86_64 1.6-1 5.00 53.00 58.00 NOTE
r-release-osx-x86_64 1.6-1 NOTE
r-oldrel-windows-ix86+x86_64 1.6-1 3.00 37.00 40.00 NOTE
r-oldrel-osx-x86_64 1.6-1 NOTE

Check Details

Version: 1.6-1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     coef.mypls vcov.mypls
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.6-1
Check: R code for possible problems
Result: NOTE
    graphic.ppls.splines: no visible global function definition for ‘par’
    graphic.ppls.splines: no visible global function definition for ‘plot’
    graphic.ppls.splines: no visible global function definition for ‘lines’
    jack.ppls: no visible global function definition for ‘cov’
    penalized.pls: no visible binding for global variable ‘var’
    penalized.pls.default: no visible global function definition for ‘var’
    penalized.pls.kernel: no visible global function definition for ‘var’
    penalized.pls.select: no visible global function definition for ‘var’
    sim.data.ppls: no visible global function definition for ‘runif’
    sim.data.ppls: no visible global function definition for ‘var’
    sim.data.ppls: no visible global function definition for ‘rnorm’
    ttest.ppls: no visible global function definition for ‘coef’
    ttest.ppls: no visible global function definition for ‘vcov’
    ttest.ppls: no visible global function definition for ‘pt’
    Undefined global functions or variables:
     coef cov lines par plot pt rnorm runif var vcov
    Consider adding
     importFrom("graphics", "lines", "par", "plot")
     importFrom("stats", "coef", "cov", "pt", "rnorm", "runif", "var",
     "vcov")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.6-1
Check: examples
Result: ERROR
    Running examples in ‘ppls-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: vcov.mypls
    > ### Title: Variance-covariance matrix of the regression coefficients
    > ### Aliases: vcov.mypls
    > ### Keywords: models
    >
    > ### ** Examples
    >
    >
    > n<-50 # number of observations
    > p<-5 # number of variables
    > X<-matrix(rnorm(n*p),ncol=p)
    > y<-rnorm(n)
    >
    >
    > pls.object<-penalized.pls.cv(X,y)
    > my.jack<-jack.ppls(pls.object)
    > myvcov<-vcov(my.jack)
    Error in UseMethod("vcov") :
     no applicable method for 'vcov' applied to an object of class "mypls"
    Calls: vcov
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64