Last updated on 2024-12-09 22:50:26 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.5.0 | 5.54 | 45.47 | 51.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.5.0 | 3.64 | 31.79 | 35.43 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.5.0 | 84.94 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.5.0 | 92.64 | OK | |||
| r-devel-windows-x86_64 | 1.5.0 | 8.00 | 87.00 | 95.00 | OK | |
| r-patched-linux-x86_64 | 1.5.0 | 4.29 | 43.72 | 48.01 | OK | |
| r-release-linux-x86_64 | 1.5.0 | 4.75 | 43.55 | 48.30 | OK | |
| r-release-macos-arm64 | 1.5.0 | 38.00 | OK | |||
| r-release-macos-x86_64 | 1.5.0 | 60.00 | OK | |||
| r-release-windows-x86_64 | 1.5.0 | 10.00 | 73.00 | 83.00 | OK | |
| r-oldrel-macos-arm64 | 1.5.0 | 40.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.5.0 | 59.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.5.0 | 9.00 | 72.00 | 81.00 | OK |
Version: 1.5.0
Check: examples
Result: ERROR
Running examples in ‘texor-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: check_markdown_file
> ### Title: check markdown file
> ### Aliases: check_markdown_file
>
> ### ** Examples
>
> article_dir <- system.file("examples/article",
+ package = "texor")
> dir.create(your_article_folder <- file.path(tempdir(), "tempdir"))
> x <- file.copy(from = article_dir, to = your_article_folder,recursive = TRUE,)
> your_article_path <- paste(your_article_folder,"article",sep="/")
> rmarkdown::pandoc_version()
[1] ‘3.6’
> texor::include_style_file(your_article_path)
[1] TRUE
> rebib::aggregate_bibliography(your_article_path)
No Bib files found !
Cannot aggregate bibliography as there is no BibTeX bibliography
No Bib files found !
BibTeX file does not exist
will parse for bibliography
bibtex file created
> texor::convert_to_markdown(your_article_path)
/usr/bin/pandoc +RTS -K512m -RTS /tmp/RtmphOEWlS/tempdir/article/RJwrapper.tex --to markdown-simple_tables-pipe_tables-fenced_code_attributes --from latex --output /tmp/RtmphOEWlS/tempdir/article/RJwrapper.md -s --resource-path /tmp/RtmphOEWlS/tempdir/article --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/issue_checker.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/abs_filter.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/bib_filter.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/equation_filter.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/image_filter.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/sec_depth.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/fig_code_chunk.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/widetable_patcher.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/R_code.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/table_caption.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/table_code_chunk.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/conversion_compat_check.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/bookdown_ref.lua --citeproc
Error running filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/fig_code_chunk.lua:
table expected, got Caption
stack traceback:
...r-devel-gcc/Work/build/Packages/texor/fig_code_chunk.lua:116: in function 'Figure'
Error: pandoc document conversion failed with error 83
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.5.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(texor)
>
> test_check("texor")
Converting page 1 to /tmp/RtmpxqbzD5/tempdir/pdf_conversion/normal.png... done!
removing the unnecessary option fig=TRUE:
* image,fig=TRUE, fig.cap="matrix package's image"
removing the unnecessary option fig=TRUE:
* keep.source=TRUE, fig=TRUE
changing keep.source=TRUE to tidy=FALSE:
* keep.source=TRUE,
changing \SweaveOpts{} to opts_chunk$set():
* \SweaveOpts{keep.source=TRUE, fig=TRUE}
/usr/bin/pandoc +RTS -K512m -RTS /tmp/RtmpxqbzD5/tempdir/sweave_article/example-knitr.Rnw --to markdown-simple_tables-pipe_tables-fenced_code_attributes --from latex --output /tmp/RtmpxqbzD5/tempdir/sweave_article/example-knitr-part1.md --resource-path /tmp/RtmpxqbzD5/tempdir/sweave_article -f /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/sweave_code_reader.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/r_code_chunk_patcher.lua
/usr/bin/pandoc +RTS -K512m -RTS /tmp/RtmpxqbzD5/tempdir/sweave_article/example-knitr.Rnw --to latex --from latex --output /tmp/RtmpxqbzD5/tempdir/sweave_article/example-generated.tex --resource-path /tmp/RtmpxqbzD5/tempdir/sweave_article -f /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/sweave_code_remove.lua
/usr/bin/pandoc +RTS -K512m -RTS /tmp/RtmpxqbzD5/tempdir/sweave_article/example-generated.tex --to markdown-simple_tables-pipe_tables-fenced_code_attributes --from latex --output /tmp/RtmpxqbzD5/tempdir/sweave_article/example-knitr-part2.md --resource-path /tmp/RtmpxqbzD5/tempdir/sweave_article -f /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/algorithm_reader.lua
/usr/bin/pandoc +RTS -K512m -RTS /tmp/RtmpxqbzD5/tempdir/sweave_article/example-generated.tex --to latex --from latex --output /tmp/RtmpxqbzD5/tempdir/sweave_article/example-generated.tex --resource-path /tmp/RtmpxqbzD5/tempdir/sweave_article -f /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/algorithm_remove.lua
Found Bib file example.bib
Cannot aggregate bibliography as there is no embedded bibliography
Found 0 Matches for target : example
Found 0 Matches for target : example
Found 0 Matches for target : example\*
Found 0 Matches for target : example\*
Found 0 Matches for target : Sin
Found 0 Matches for target : Sin
Found 0 Matches for target : Sout
Found 0 Matches for target : Sout
Found 0 Matches for target : Scode
Found 0 Matches for target : Scode
Found 0 Matches for target : Sinput
Found 0 Matches for target : Sinput
Found 0 Matches for target : Soutput
Found 0 Matches for target : Soutput
Found 0 Matches for target : smallverbatim
Found 0 Matches for target : smallverbatim
Found 0 Matches for target : boxedverbatim
Found 0 Matches for target : boxedverbatim
Found 0 Matches for target : smallexample
Found 0 Matches for target : smallexample
Found 0 Matches for target : table\*
Changed \begin{table\*} to \begin{table}
Found 0 Matches for target : table\*
Changed \end{table*} to \end{table}
Found 0 Matches for target : multicolumn
changed \multicolumn to \multicolumnx
Found 0 Matches for target : widetable
Changed \begin{widetable} to \begin{table}
Found 0 Matches for target : widetable
Changed \end{widetable} to \end{table}
Auto add label for table env
Found 0 Matches for target : figure\*
Changed \begin{figure\*} to \begin{figure}
Found 0 Matches for target : figure\*
Changed \end{figure\*} to \end{figure}
Found 0 Matches for target : widefigure
Changed \begin{widefigure} to \begin{figure}
Found 0 Matches for target : widefigure
Changed \end{widefigure} to \end{figure}
Found 0 Matches for target : widefigure\*
Changed \begin{widefigure\*} to \begin{figure}
Found 0 Matches for target : widefigure\*
Changed \end{widefigure\*} to \end{figure}
/usr/bin/pandoc +RTS -K512m -RTS /tmp/RtmpxqbzD5/tempdir/sweave_article/RJwrapper.tex --to native --from latex --output /tmp/RtmpxqbzD5/tempdir/sweave_article/temp-native.txt -s --resource-path /tmp/RtmpxqbzD5/tempdir/sweave_article/RJwrapper.tex --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/find_pdf_files.lua
Found 0 Matches for target : figure\*
Changed \begin{figure\*} to \begin{figure}
Found 0 Matches for target : figure\*
Changed \end{figure\*} to \end{figure}
Found 0 Matches for target : widefigure
Changed \begin{widefigure} to \begin{figure}
Found 0 Matches for target : widefigure
Changed \end{widefigure} to \end{figure}
Found 0 Matches for target : widefigure\*
Changed \begin{widefigure\*} to \begin{figure}
Found 0 Matches for target : widefigure\*
Changed \end{widefigure\*} to \end{figure}
Found 0 Matches for target : algorithm
Changed \begin{algorithm} to \begin{figure}
Found 0 Matches for target : algorithm
Changed \end{algorithm} to \end{figure}
/usr/bin/pandoc +RTS -K512m -RTS /tmp/RtmpxqbzD5/tempdir/sweave_article/RJwrapper.tex --to markdown-simple_tables-pipe_tables-fenced_code_attributes --from latex --output /tmp/RtmpxqbzD5/tempdir/sweave_article/RJwrapper.md -s --resource-path /tmp/RtmpxqbzD5/tempdir/sweave_article --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/issue_checker.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/abs_filter.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/bib_filter.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/equation_filter.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/image_filter.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/sec_depth.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/fig_code_chunk.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/widetable_patcher.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/R_code.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/table_caption.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/table_code_chunk.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/conversion_compat_check.lua --lua-filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/bookdown_ref.lua --citeproc
Error running filter /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/texor/fig_code_chunk.lua:
table expected, got Caption
stack traceback:
...r-devel-gcc/Work/build/Packages/texor/fig_code_chunk.lua:116: in function 'Figure'
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 18 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-rnw-tools.R:7:5'): Convert Rnw to Rmd ──────────────────────────
Error: pandoc document conversion failed with error 83
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-rnw-tools.R:7:5
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─texor::rnw_to_rmd(...)
5. └─texor::convert_to_markdown(...)
6. └─rmarkdown::pandoc_convert(...)
7. └─rmarkdown:::stop2(...)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 18 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc