Cyclops: Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis

This model fitting tool incorporates cyclic coordinate descent and majorization-minimization approaches to fit a variety of regression models found in large-scale observational healthcare data. Implementations focus on computational optimization and fine-scale parallelization to yield efficient inference in massive datasets. Please see: Suchard, Simpson, Zorych, Ryan and Madigan (2013) <doi:10.1145/2414416.2414791>.

Version: 2.0.1
Depends: R (≥ 3.1.0)
Imports: Matrix, Rcpp (≥ 0.12.12), bit, ff, ffbase, methods, survival, MASS
LinkingTo: Rcpp, BH (≥ 1.51.0), RcppEigen (≥ 0.3.2)
Suggests: testthat, gnm, ggplot2, microbenchmark
Published: 2018-09-23
Author: Marc A. Suchard [aut, cre], Martijn J. Schuemie [aut], Trevor R. Shaddox [aut], Yuxi Tian [aut], Jianxiao Yang [aut], Sushil Mittal [ctb], Observational Health Data Sciences and Informatics [cph], Marcus Geelnard [cph, ctb] (provided the TinyThread library), Rutgers University [cph, ctb] (provided the HParSearch routine), R Development Core Team [cph, ctb] (provided the ZeroIn routine)
Maintainer: Marc A. Suchard <msuchard at ucla.edu>
BugReports: https://github.com/ohdsi/cyclops/issues
License: Apache License 2.0
URL: https://github.com/ohdsi/cyclops
NeedsCompilation: yes
Citation: Cyclops citation info
Materials: README NEWS
In views: Survival
CRAN checks: Cyclops results

Downloads:

Reference manual: Cyclops.pdf
Package source: Cyclops_2.0.1.tar.gz
Windows binaries: r-devel: Cyclops_2.0.1.zip, r-release: Cyclops_2.0.1.zip, r-oldrel: Cyclops_2.0.1.zip
OS X binaries: r-release: Cyclops_2.0.1.tgz, r-oldrel: Cyclops_2.0.1.tgz
Old sources: Cyclops archive

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