IDSL.CSA: Composite Spectra Analysis (CSA) for High-Resolution Mass Spectrometry Analyses

A fragmentation spectra detection pipeline for high-throughput LC/HRMS data processing using peaklists generated by the 'IDSL.IPA' package. The 'IDSL.CSA' package can deconvolute fragmentation spectra from Composite Spectra Analysis (CSA), Data Dependent Acquisition (DDA) analysis, and various Data-Independent Acquisition (DIA) methods such as MS^E, All-Ion Fragmentation (AIF) and SWATH analysis.

Version: 1.0
Depends: R (≥ 4.0)
Imports: IDSL.MXP (≥ 1.8), IDSL.IPA (≥ 2.6), IDSL.FSA, doParallel, foreach, readxl
Published: 2023-01-23
Author: Sadjad Fakouri-Baygi ORCID iD [cre, aut], Dinesh Barupal ORCID iD [aut]
Maintainer: Sadjad Fakouri-Baygi <sadjad.fakouri-baygi at>
License: MIT + file LICENSE
NeedsCompilation: no
CRAN checks: IDSL.CSA results


Reference manual: IDSL.CSA.pdf


Package source: IDSL.CSA_1.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): IDSL.CSA_1.0.tgz, r-oldrel (arm64): IDSL.CSA_1.0.tgz, r-release (x86_64): IDSL.CSA_1.0.tgz, r-oldrel (x86_64): IDSL.CSA_1.0.tgz


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