ISOpureR: Deconvolution of Tumour Profiles

Deconvolution of mixed tumour profiles into normal and cancer for each patient, using the ISOpure algorithm in Quon et al. Genome Medicine, 2013 5:29. Deconvolution requires mixed tumour profiles and a set of unmatched "basis" normal profiles.

Version: 1.1.0
Depends: R (≥ 3.1.1)
Imports: Rcpp (≥ 0.11.3), stats, futile.logger
LinkingTo: Rcpp, RcppEigen (≥ 0.3.2.2.0)
Suggests: knitr
Published: 2017-11-10
Author: Gerald Quon [aut], Catalina V Anghel [aut, trl], Syed Haider [aut], Francis Nguyen [aut], Amit G Deshwar [aut], Quaid D Morris [aut], Paul C Boutros [aut, cre]
Maintainer: Paul C Boutros <Paul.Boutros at oicr.on.ca>
License: GPL-2
NeedsCompilation: yes
Materials: NEWS
CRAN checks: ISOpureR results

Downloads:

Reference manual: ISOpureR.pdf
Vignettes: Guide for using ISOpureR
Package source: ISOpureR_1.1.0.tar.gz
Windows binaries: r-devel: ISOpureR_1.1.0.zip, r-release: ISOpureR_1.1.0.zip, r-oldrel: ISOpureR_1.1.0.zip
OS X El Capitan binaries: r-release: ISOpureR_1.1.0.tgz
OS X Mavericks binaries: r-oldrel: ISOpureR_1.1.0.tgz
Old sources: ISOpureR archive

Reverse dependencies:

Reverse suggests: NNLM

Linking:

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