NEArender: Network Enrichment Analysis

Performs network enrichment analysis against functional gene sets. Benchmarks networks. Renders raw gene profile matrices of dimensionality 'Ngenes x Nsamples' into the space of gene set (typically pathway) enrichment scores of dimensionality 'Npathways x Nsamples'.

Version: 1.4
Depends: R (≥ 3.0.0)
Imports: parallel, RColorBrewer, ROCR, stats, MASS
Suggests: knitr, rmarkdown, data.table
Published: 2016-12-05
Author: Andrey Alexeyenko [aut, cph, ths], Ashwini Jeggari [aut, cre]
Maintainer: Ashwini Jeggari <ashwinipriya.jeggari at ki.se>
License: GPL-3
NeedsCompilation: no
CRAN checks: NEArender results

Downloads:

Reference manual: NEArender.pdf
Vignettes: NEArender R-package
Package source: NEArender_1.4.tar.gz
Windows binaries: r-devel: NEArender_1.4.zip, r-release: NEArender_1.4.zip, r-oldrel: NEArender_1.4.zip
OS X Mavericks binaries: r-release: NEArender_1.4.tgz, r-oldrel: NEArender_1.4.tgz
Old sources: NEArender archive

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