StructFDR: False Discovery Control Procedure Integrating the Prior Structure Information

Perform more powerful false discovery control (FDR) for microbiome data, taking into account the prior phylogenetic relationship among bacteria species. As a general methodology, it is applicable to any type of (genomic) data with prior structure information.

Version: 1.2
Depends: R (≥ 3.1.0), nlme, ape, cluster, dirmult, matrixStats
Suggests: MASS, knitr, rmarkdown, ggplot2, reshape
Published: 2017-04-13
Author: Jun Chen
Maintainer: Jun Chen <chen.jun2 at mayo.edu>
License: GPL-2
NeedsCompilation: no
CRAN checks: StructFDR results

Downloads:

Reference manual: StructFDR.pdf
Vignettes: Illustration of StructFDR package for microbiome-wide association studies
Package source: StructFDR_1.2.tar.gz
Windows binaries: r-devel: StructFDR_1.2.zip, r-release: StructFDR_1.2.zip, r-oldrel: StructFDR_1.2.zip
OS X El Capitan binaries: r-release: StructFDR_1.2.tgz
OS X Mavericks binaries: r-oldrel: StructFDR_1.2.tgz
Old sources: StructFDR archive

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