The following R functions are used for inference of trait associations with haplotypes and other covariates in generalized linear models. The functions are developed primarily for data collected in cohort or cross-sectional studies. They can accommodate uncertain haplotype phase and handle missing genotypes at some SNPs.
| Version: | 1.2-6 |
| Depends: | R (≥ 2.6.0), stats |
| Published: | 2012-09-22 |
| Author: | K. Burkett, B. McNeney, J. Graham, with code for case-control data contributed by Zhijian Chen |
| Maintainer: | K. Burkett <kburkett at sfu.ca> |
| License: | GPL-2 |
| URL: | http://stat.sfu.ca/statgen/research/hapassoc.html |
| NeedsCompilation: | yes |
| Citation: | hapassoc citation info |
| In views: | Genetics |
| CRAN checks: | hapassoc results |
| Package source: | hapassoc_1.2-6.tar.gz |
| MacOS X binary: | hapassoc_1.2-6.tgz |
| Windows binary: | hapassoc_1.2-6.zip |
| Reference manual: | hapassoc.pdf |
| Vignettes: |
hapassoc |
| News/ChangeLog: | ChangeLog |
| Old sources: | hapassoc archive |