heritability: Marker-Based Estimation of Heritability Using Individual Plant or Plot Data

Implements marker-based estimation of heritability when observations on genetically identical replicates are available. These can be either observations on individual plants or plot-level data in a field trial. Heritability can then be estimated using a mixed model for the individual plant or plot data. For comparison, also mixed-model based estimation using genotypic means and estimation of repeatability with ANOVA are implemented. For illustration the package contains several datasets for the model species Arabidopsis thaliana.

Version: 1.2
Depends: R (≥ 2.10), MASS (≥ 3.1.20)
Suggests: synbreed
Published: 2016-12-22
Author: Willem Kruijer, with a contribution from Ian White (the internal function pin). Contains data collected by Padraic Flood and Rik Kooke.
Maintainer: Willem Kruijer <willem.kruijer at wur.nl>
License: GPL-3
URL: https://sites.google.com/site/wkruijer/
NeedsCompilation: no
CRAN checks: heritability results

Downloads:

Reference manual: heritability.pdf
Package source: heritability_1.2.tar.gz
Windows binaries: r-devel: heritability_1.2.zip, r-release: heritability_1.2.zip, r-oldrel: heritability_1.2.zip
OS X Mavericks binaries: r-release: heritability_1.2.tgz, r-oldrel: heritability_1.2.tgz
Old sources: heritability archive

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