Breadcrumb
Monte Carlo Computation Publications
| Past acidification and recovery of surface waters, soils and ecology in the United Kingdom: Prospects for the future under current deposition and land use protocols (2013) R.C. Helliwell, J. Aherne, G. MacDougall, T.R. Nisbet, D. Lawson, B.J. Cosby and C.D. Evans Ecological Indicators DOI: dx.doi.org/10.1016/j.ecolind.2013.02.005 URL provided by the author |
| A statistical method for determining the volume of volcanic fall deposits (2013) R.E. Burden, L. Chen, J.C. Phillips Communications on Stochastic Analysis DOI: 10.1007/s00445-013-0707-4 URL provided by the author |
| Similarity matrices and clustering algorithms for population identifcation using genetic data (2012) Daniel Lawson and Daniel Falush Annual Review of Human Genomics, vol: 13, Pages: 337 - 361 DOI: abs/10.1146/annurev-genom-08241 URL provided by the author |
| Inference of population structure using dense haplotype data (2012) Daniel Lawson, Garrett Hellenthal, Simon Myers, and Daniel Falush PLoS Genetics, vol: 8, Issue: 1, Page: e1002453 URL provided by the author |
| Sequential Monitoring of a Bernoulli Sequence when the Pre-change Parameter is Unknown (2012) G. J. Ross, D. K. Tasoulis, N. M. Adams Computational Statistics |
| Exponentially Weighted Moving Average Charts for Detecting Concept Drift (2012) G. J. Ross, D. K. Tasoulis, N. M. Adams, D. J. Hand Pattern Recognition Letters, vol: 33, Issue: 2, Pages: 191 - 198 |
| Two Nonparametric Control Charts for Detecting Arbitrary Distribution Changes (2012) G. J. Ross, N. M. Adams Journal of Quality Technology, vol: 44, Issue: 2, Pages: 102 - 116 |
| Implications of changing the minimal survival benefit in liver transplantation (2012) Knight, M, Barber, K., Gimson, A., Collett, D., Neuberger, J. Liver Transplantation DOI: DOI: 10.1002/lt.23380 |
| Bayesian analysis of non-linear differential equation models with application to a gut microbial ecosystem (2011) Daniel Lawson, Grietje Holtrop and Harry Flint The Biometrical Journal, vol: 53, Pages: 543 - 556 URL provided by the author |
| Nonparametric Monitoring of Data Streams for Changes in Location and Scale (2011) G. J. Ross, D. K. Tasoulis, N. M. Adams Technometrics, vol: 53, Issue: 4, Pages: 379 - 389 |
| Spectral estimation for locally stationary time series with missing observations (2011) Knight MI, Nunes MA, Nason GP Statistics and Computing, vol: 21 DOI: 10.1007/s11222-011-9256-x |
| Likelihood-free estimation of model evidence (2011) Xavier Didelot Richard G. Everitt, Adam M. Johansen and Daniel J. Lawson Bayesian Analysis, vol: 6, Pages: 49 - 76 URL provided by the author |
| Likelihood-Free Inference of Population Structure and Local Adaptation in a Bayesian Hierarchical Model. (2010) Bazin, E., K. J. Dawson, and M. A. Beaumont Genetics, vol: 185, Pages: 587 - 602 |
| Approximate Bayesian computation in evolution and ecology (2010) Beamont, M.A. Annual Review of Ecology, Evolution, and Systematics, vol: 41, Pages: 379 - 406 |
| In defence of model-based inference in phylogeography REPLY. (2010) Beaumont, M. A., R. Nielsen, C. Robert, J. Hey, O. Gaggiotti, L. Knowles, A. Estoup, M. Panchal, J. Corander, M. Hickerson, S. A. Sisson, N. Fagundes, L. Chikhi, P. Beerli, R. Vitalis, J. M. Cornuet, J. Huelsenbeck, M. Foll, Z. H. Yang, F. Rousset, D. Bal Molecular Ecology, vol: 19, Pages: 436 - 446 |
| The Confounding Effects of Population Structure, Genetic Diversity and the Sampling Scheme on the Detection and Quantification of Population Size Changes. (2010) Chikhi, L., V. C. Sousa, P. Luisi, B. Goossens, and M. A. Beaumont Genetics, vol: 186, Pages: 983 - 995 |
| Graphical models for inference under outcome dependent sampling (2010) Didelez, Kreiner, Keiding Statistical Science, vol: 25, Pages: 368 - 387 DOI: 10.1214/10-STS340 URL provided by the author |
| On solving integral equations using Markov chain Monte Carlo methods (2010) Doucet, A; Johansen, AM; Tadic, VB Applied Math. and Comp., vol: 216, Issue: 10, Pages: 2869 - 2880 |
| The simple harmonic urn (2010) Edward Crane, Nicholas Georgiou, Stanislav Volkov, Andrew Wade and Robert Waters Annals of Probability |
| Combining genetic, historical and geographical data to reconstruct the dynamics of bioinvasions: application to the cane toad Bufo marinus. (2010) Estoup, A., S. J. E. Baird, N. Ray, M. Currat, J. M. Cornuet, F. Santos, M. A. Beaumont, and L. Excoffier. Molecular Ecology Resources, vol: 10, Pages: 886 - 901 |
| Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data. (2010) Guillemaud, T., M. A. Beaumont, M. Ciosi, J. M. Cornuet, and A. Estoup. Heredity, vol: 104, Pages: 88 - 99 |
| Posterior Weighted Reinforcement Learning with State Uncertainty (2010) Larsen, T; Leslie, DS; Collins, EJ, et al. Neural Computation, vol: 22, Pages: 1149 - 1179 |
| Reply to Robert et al.: Model criticism informs model choice and model comparison (2010) Ratmann, O; Andrieu, C; Wiuf, C, et al. Proceedings of the National Academy of Sciences, USA, vol: 107, Issue: 3, Pages: E6 - E7 |
| Stability of a growth process generated by monomer filling with nearest-neighbor cooperative effects (2010) Stanislav Volkov and Vadim Shcherbakov Stochastic Processes and their Applications,, Pages: na - na URL provided by the author |
| The fixation probability of two competing beneficial mutations (2010) Yu, Feng; Etheridge, Alison Theoretical Population Biology, vol: 78, Issue: 1, Pages: 36 - 45 |
| Inference of Homologous Recombination in Bacteria Using Whole Genome Sequences (2010) avier Didelot, Daniel Lawson, Aaron Darling and Daniel Falush Genetics, vol: 186, Pages: 1435 - 1449 URL provided by the author |
| Enumerating the decomposable neighbours of a decomposable graph under a simple perturbation scheme (2009) Alun Thomas and Peter J. Green Computational Statistics and Data Analysis, vol: 53, Pages: 1232 - 1238 DOI: 10.1016/j.csda.2008.10.029 URL provided by the author |
| Adaptive approximate Bayesian computation (2009) Beaumont, M. A., J. M. Cornuet, J. M. Marin, and C. P. Robert Biometrika, vol: 96, Pages: 983 - 990 |
| A novel parallel approach to the likelihood-based estimation of admixture in population genetics. (2009) Giovannini, A., G. Zanghirati, M. A. Beaumont, L. Chikhi, and G. Barbujani. Bioinformatics, vol: 25, Pages: 1440 - 1441 |
| Expert Knowledge and Multivariate Emulation: The Thermosphere-Ionosphere Electrodynamics General Circulation Model (TIE-GCM) (2009) J.C. Rougier, S. Guillas, A. Maute, A.D. Richmond Technometrics, vol: 51, Pages: 414 - 424 DOI: doi:10.1198/TECH.2009.07123 |
| A nondecimated lifting transform (2009) Knight MI, Nason GP Statistics and Computing, vol: 19, Pages: 1 - 16 DOI: 10.1007/s11222-008-9062-2 |
| Efficient Utility-based Clustering over High Dimensional Partition Spaces (2009) Liverani, S., Anderson, P. E., Edwards, K. D., Millar, A. J. and Smith, J. Q. Bayesian Analysis, vol: 4, Issue: 3, Pages: 539 - 572 URL provided by the author |
| PopABC: a program to infer historical demographic parameters (2009) Lopes, J. S., D. Balding, and M. A. Beaumont Bioinformatics, vol: 25, Pages: 2747 - 2749 |
| On the use of simple dynamical systems for climate predictions: A Bayesian prediction of the next glacial inception (2009) M. Crucifix and J.C. Rougier The European Physics Journal - Special Topics, vol: 174, Pages: 11 - 31 DOI: DOI:10.1140/epjst/e2009-01087-5 |
| Learning to Count: Robust Estimates for Labeled Distances between Molecular Sequences (2009) O'Brien, J.D, Minin, V.N., Suchard, M.A. Molecular Biology and Evolution DOI: 10.1093/molbev/msp003 |
| Approximate Bayesian Computation Without Summary Statistics: The Case of Admixture. (2009) Sousa, V. C., M. Fritz, M. A. Beaumont, and L. Chikhi Genetics, vol: 181, Pages: 1507 - 1519 |
| Forest fires on Z+ with ignition only at 0 (2009) Stanislav Volkov ALEA Latin American Journal of Probability and Mathematical Statistics, vol: 6, Pages: 399 - 414 URL provided by the author |
| Queueing with neighbours (2009) Stanislav Volkov and Vadim Shcherbakov Probability and Mathematical Genetics: Papers in Honour of Sir John Kingman Editors: N. H. Bingham and C. M. Goldie Page numbers: 463 - 481 Publisher: London Mathematical Society Lecture Notes Series URL provided by the author |
| On stability of adsorption processes (2009) Stanislav Volkov and Vadim Shcherbakov Contemporary Problems of Mathematics and Mechanics. Editors: Shiryaev, A.N. Page numbers: 166 - 174 Publisher: Moscow State University Press URL provided by the author |
| EAKF-CMAQ: Introduction and evaluation of a data assimilation for CMAQ based on the Ensemble Adjustment Kalman filter (2008) A. Zubrow, L. Chen and V.R. Kotamarthi J. Geophys. Res., vol: 113 DOI: 10.1029/2007JD009267 URL provided by the author |
| On Potts model clustering,kernel K-means and density estimation, in press (2008) A.Murua, L.I.Stanberry, W.Stuetzle. Journal of Computational and Graphical Statistics |
| Markov Chains (2008) Adam M. Johansen Encyclopedia of Computer Science and Engineering Publisher: Wiley URL provided by the author |
| SMCTC: Sequential Monte Carlo in C++ (2008) Adam M. Johansen Statistics Group Research Report 08:16 URL provided by the author |
| A note on auxiliary particle filters (2008) Adam M. Johansen and Arnaud Doucet Statistics & Probability Letters, vol: 78, Issue: 12, Pages: 1498 - 1504 URL provided by the author |
| Particle methods for maximum likelihood parameter estimation in latent variable models. (2008) Adam M. Johansen, Arnaud Doucet and Manuel Davy Statistics and Computing, vol: 18, Issue: 1, Pages: 47 - 57 URL provided by the author |
| Inferring population history with DIY ABC: a user-friendly approach to approximate Bayesian computation (2008) Cornuet, J. M., F. Santos, M. A. Beaumont, C. P. Robert, J. M. Marin, D. J. Balding, T. Guillemaud, and A. Estoup. Bioinformatics, vol: 24, Pages: 2713 - 2719 |
| Using the autocorrelation time and auto-validating methods to improve the performance of Monte Carlo algorithms (2008) Everitt, R.G. PhD thesis URL provided by the author |
| An approximate Bayesian computation approach to overcome biases that arise when using amplified fragment length polymorphism markers to study population structure. (2008) Foll, M., M. A. Beaumont, and O. Gaggiotti. Genetics, vol: 179, Pages: 927 - 939 |
| An urn model for odds ratio based adaptive phase III clinical trials (2008) Gopal Basak, Atanu Biswas, Stanislav Volkov Markov Processes and Related Fields URL provided by the author |
| Functional connectivity mapping using the ferromagnetic Potts spin model. (2008) L.I.Stanberry, A.Murua, D.Cordes. Human Brain Mapping, vol: 29, Issue: 4, Pages: 422 - 440 DOI: 10.1002/hbm.20397 |
| Learning to signal: analysis of a micro-level reinforcement model (2008) Raffaele Argiento, Robin Pemantle, Brian Skyrms, Stanislav Volkov Stochastic Processes and their Applications, URL provided by the author |
| Separation measures and the geometry of Bayes factor selection for classification (2008) Smith, J. Q., Anderson, P. E. and Liverani, S. J. Royal Statist. Soc. B (Methodological), vol: 70, Issue: 5, Pages: 957 - 980 |
| Assessing probabilistic forecasts of multivariate quantities, with applications to ensemble predictions of surface winds. Invited discussion paper. (2008) T.Gneiting, L.I.Stanberry, E.Grimit, L.Held, N.Johnson. TEST, vol: 17, Issue: 2, Pages: 211 - 235 DOI: 10.1007/s11749-008-0114-x |
| ONeSAMP: a program to estimate effective population size using approximate Bayesian computation (2008) Tallmon, D. A., A. Koyuk, G. Luikart, and M. A. Beaumont Molecular Ecology Resources, vol: 8, Pages: 299 - 301 |
| Generalised linear mixed model analysis via sequential Monte Carlo sampling (2008) Yanan Fan, David S. Leslie and Matt P. Wand Electronic Journal of Statistics, vol: 2, Pages: 916 - 938 URL provided by the author |
| A note on the accuracy of PAC-likelihood inference with microsatellite data (2007) Cornuet, J. M., and M. A. Beaumont Theoretical Population Biology, vol: 71, Pages: 12 - 19 |
| Simulation of the annual loss distribution in operational risk via Panjer recursions and Volterra integral equations for value at risk and expected shortfall estimation (2007) Gareth Peters, Adam M. Johansen and Arnaud Doucet Journal of Operational Risk, vol: 2, Issue: 3, Pages: 29 - 58 |
| Single-molecule level analysis of the subunit composition of the T cell receptor on live T cells (2007) J. R. James and S. S. White and R. W. Clarke and A. M. Johansen et al. Proceedings of the National Academt of Sciences, USA, vol: 104, Issue: 45, Pages: 17662 - 17667 URL provided by the author |
| Random environment on coloured trees (2007) Mikhail Menshikov, Dimitri Petritis, Stanislav Volkov Bernoulli, vol: 13, Pages: 966 - 980 URL provided by the author |
| Efficient Monte Carlo filtering for discretely observed jumping processes (2007) N. Whiteley, A. M. Johansen and S. J. Godsill Proceedings of IEEE Workshop on Statistical Signal Processing Page numbers: 89 - 93 Month: August URL provided by the author |
| The automation and evaluation of nested clade phylogeographic analysis. (2007) Panchal, M., and M. A. Beaumont Evolution, vol: 61, Pages: 1466 - 1480 |
| The Retirement Behaviour of the Self-Employed in Britain (2007) S.C. Parker and J.C. Rougier Applied Economics, vol: 39, Pages: 697 - 713 |
| Convergence of the SMC implementation of the PHD filter (2006) A. M. Johansen, S. S. Singh, A. Doucet, and B.-N. Vo. Methodology and Computing in Applied Probability, vol: 8, Issue: 2, Pages: 265 - 291 URL provided by the author |
| Sequential Monte Carlo samplers for rare events. (2006) Adam M. Johansen, Pierre Del Moral and Arnaud Doucet Proceedings of the 6th International Workshop on Rare Event Simulation, Editors: Werner Sandmann Address: Otto-Friedrich-Universitat, Bamberg, Germany Month: October URL provided by the author |
| Spatial-Temporal Statistical Modeling and Prediction of Environmental Processe (2006) L. Chen, M. Fuentes and J. Davis Applications of Computational Statistics in the Environmental Sciences: Hierarchical Bayes and MCMC Methods Editors: James S Clark and Alan Gelfand Publisher: Oxford University Press |
| Low frequency signal changes reflect differences in functional connectivity between good readers and dyslexics during continuous phoneme mapping. (2006) L.I.Stanberry, T.Richards, V.W.Berninger, R.R.Nandy, E.Aylward,K.Maravilla, D.Cordes. Magnetic Resonance Imaging, vol: 24, Issue: 3, Pages: 217 - 229 DOI: doi:10.1016/j.mri.2005.12.006 |
| Periodicity in the transient regime of exhaustive polling systems (2006) Mikhail Menshikov, Iain MacPhee, Serguei Popov, Stanislav Volkov Annals of Applied Probability, vol: 16, Issue: 4, Pages: 1816 - 1850 URL provided by the author |
| Trading Volume and Contract Rollover in Futures Contracts (2005) P.R. Holmes and J.C. Rougier Journal of Empirical Finance, vol: 12, Pages: 317 - 338 |
| Particle Methods for Change Detection, System Identification and Control (2004) C. Andrieu, A. Doucet, S.S. Singh and V.B. Tadić |
| Bayesian variable selection and the Swendsen-Wang algorithm (2004) David Nott and Peter Green Journal of Computational and Graphical Statistics, vol: 13, Pages: 141 - 157 URL provided by the author |
| MCMC for machine learning (2003) C. Andrieu, A. Doucet, N. de Freitas and M. Jordan Machine Learning |
| Efficient Particle Filtering for Jump Markov Systems - Applications to Time-Varying Autoregressions (2003) C. Andrieu, M. Davy and A. Doucet IEEE Trans. Signal Processing, vol: 51, Issue: 7, Pages: 1762 - 1770 |
| Cluster analysis of fMRI data using dendrogram sharpening. (2003) L.I.Stanberry, R.R.Nandy, D.Cordes. Human Brain Mapping, vol: 20, Issue: 4, Pages: 201 - 219 DOI: 10.1002/hbm.10143 |
| Particle Filtering for Partially Observed Gaussian State Space Models (2002) C. Andrieu and A. Doucet J. Royal Statist. Soc. B (Methodological), vol: 64, Issue: 4, Pages: 827 - 836 |
| Iterative Algorithms for State Estimation of Jump Markov Linear Systems (2001) A. Doucet and C. Andrieu IEEE Trans. Signal Processing, vol: 49, Issue: 6, Pages: 1216 - 1227 |
| Optimal Estimation of Amplitude and Phase Modulated Signals (2001) C. Andrieu and A. Doucet Monte Carlo Methods and Applications, vol: 7, Issue: 1-2, Pages: 1 - 14 |
| MCMC Computation for Bayesian Model Selection (2001) C. Andrieu, P.M. Djurić and A. Doucet Signal Processing, vol: 81, Issue: 1, Pages: 19 - 37 |
| Delayed rejection in reversible jump Metropolis-Hastings (2001) Peter Green and Antonietta Mira Biometrika, vol: 88, Pages: 1035 - 1053 URL provided by the author |
| Measuring Social Mobility as Unpredictability (2001) S.C. Parker and J.C. Rougier Economica, vol: 68, Pages: 63 - 76 |
| On Sequential Monte Carlo Sampling Methods for Bayesian Filtering (2000) A. Doucet, S.J. Godsill and C. Andrieu Statistics and Computing, vol: 10, Issue: 3, Pages: 197 - 208 |
| An Improved Method for Uniform Simulation of Stable Minimum Phase Real ARMA(p,q) Processes (1999) C. Andrieu and A. Doucet IEEE Signal Processing Letters, vol: 6, Issue: 6, Pages: 142 - 144 |