* using log directory 'd:/Rcompile/CRANpkg/local/4.5/DGEobj.utils.Rcheck'
* using R Under development (unstable) (2024-06-07 r86704 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'DGEobj.utils/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DGEobj.utils' version '1.0.6'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'DGEobj.utils' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s] OK
* checking whether the package can be unloaded cleanly ... [1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s] OK
* checking loading without being on the library search path ... [1s] OK
* checking whether startup messages can be suppressed ... [1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [6s] OK
* checking Rd files ... [1s] NOTE
checkRd: (-1) runContrasts.Rd:79: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:80: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:81: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:82: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [2s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [102s] ERROR
  Running 'testthat.R' [102s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(DGEobj.utils)
  > 
  > test_check("DGEobj.utils")
  Loading required package: DGEobj
  Loading required package: statmod
  Loading required package: RNASeqPower
  Loading required package: edgeR
  Loading required package: limma
  Number of significant surrogate variables is:  11 
  Iteration (out of 5 ):1  2  3  4  5  Number of significant surrogate variables is:  10 
  Iteration (out of 5 ):1  2  3  4  5  Number of significant surrogate variables is:  43 
  Iteration (out of 5 ):Error in brio::read_lines(path) : Allocation of size 1048576 failed
  Calls: test_check ... doTryCatch -> lapply -> FUN -> source_file -> <Anonymous>
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [2s] ERROR
Error(s) in re-building vignettes:
--- re-building 'DGEobj.utils_Workflow.Rmd' using rmarkdown
pandoc.exe: osCommitMemory: VirtualAlloc MEM_COMMIT failed to commit 1048576 bytes of memory  (error code: 1455): Die Auslagerungsdatei ist zu klein, um diesen Vorgang durchzuführen.
Error: processing vignette 'DGEobj.utils_Workflow.Rmd' failed with diagnostics:
pandoc document conversion failed with error 251
--- failed re-building 'DGEobj.utils_Workflow.Rmd'

SUMMARY: processing the following file failed:
  'DGEobj.utils_Workflow.Rmd'

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [0s] WARNING
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
* checking PDF version of manual without index ... ERROR
Re-running with no redirection of stdout/stderr.
* checking HTML version of manual ... [3s] OK
* DONE
Status: 3 ERRORs, 1 WARNING, 1 NOTE