CRAN Package Check Results for Package biomartr

Last updated on 2019-09-15 22:49:15 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9.0 22.39 180.16 202.55 ERROR
r-devel-linux-x86_64-debian-gcc 0.9.0 19.41 140.02 159.43 OK
r-devel-linux-x86_64-fedora-clang 0.9.0 260.62 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9.0 239.18 NOTE
r-devel-windows-ix86+x86_64 0.9.0 58.00 218.00 276.00 OK
r-patched-linux-x86_64 0.9.0 20.36 167.14 187.50 OK
r-patched-solaris-x86 0.9.0 333.90 NOTE
r-release-linux-x86_64 0.9.0 19.56 167.29 186.85 OK
r-release-windows-ix86+x86_64 0.9.0 32.00 188.00 220.00 OK
r-release-osx-x86_64 0.9.0 ERROR
r-oldrel-windows-ix86+x86_64 0.9.0 35.00 231.00 266.00 OK
r-oldrel-osx-x86_64 0.9.0 NOTE

Check Details

Version: 0.9.0
Check: examples
Result: ERROR
    Running examples in 'biomartr-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: listDatabases
    > ### Title: Retrieve a List of Available NCBI Databases for Download
    > ### Aliases: listDatabases listNCBIDatabases
    >
    > ### ** Examples
    >
    > # retrieve all versions of the NCBI 'nr' database that can be downloaded
    > listNCBIDatabases(db = "nr")
    Error in function (type, msg, asError = TRUE) : server response timeout
    Calls: listNCBIDatabases ... strsplit -> <Anonymous> -> curlPerform -> <Anonymous> -> fun
    Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.9.0
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘fs’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-oldrel-osx-x86_64

Version: 0.9.0
Check: package dependencies
Result: ERROR
    Packages required but not available: 'biomaRt', 'Biostrings'
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64