CRAN Package Check Results for Package demi

Last updated on 2019-09-17 22:48:05 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.2 8.68 53.78 62.46 NOTE
r-devel-linux-x86_64-debian-gcc 1.1.2 6.59 42.58 49.17 NOTE
r-devel-linux-x86_64-fedora-clang 1.1.2 84.15 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1.2 76.82 NOTE
r-devel-windows-ix86+x86_64 1.1.2 26.00 79.00 105.00 NOTE
r-patched-linux-x86_64 1.1.2 7.91 52.65 60.56 NOTE
r-patched-solaris-x86 1.1.2 108.20 NOTE
r-release-linux-x86_64 1.1.2 9.59 52.69 62.28 NOTE
r-release-windows-ix86+x86_64 1.1.2 17.00 78.00 95.00 NOTE
r-release-osx-x86_64 1.1.2 ERROR
r-oldrel-windows-ix86+x86_64 1.1.2 22.00 77.00 99.00 NOTE
r-oldrel-osx-x86_64 1.1.2 NOTE

Check Details

Version: 1.1.2
Check: R code for possible problems
Result: NOTE
    DEMIPathway: no visible global function definition for 'dhyper'
    DEMIPathway: no visible global function definition for 'p.adjust'
    calcHypergeoExon: no visible global function definition for 'dhyper'
    calcHypergeoProb: no visible global function definition for 'dhyper'
    demi: no visible global function definition for 'write.table'
    demi.t.test: no visible global function definition for 't.test'
    demi.wilcox.test: no visible global function definition for
     'wilcox.test'
    demi.wilcox.test.fast: no visible global function definition for
     'wilcox.test'
    demiequal: no visible global function definition for 'wilcox.test'
    wprob: no visible global function definition for 'combn'
    diffexp,DEMIDiff: no visible global function definition for 'median'
    diffexp,DEMIDiff: no visible global function definition for 'p.adjust'
    loadAnnotation,DEMIExperiment-environment: no visible global function
     definition for 'data'
    loadBlat,DEMIExperiment-environment: no visible global function
     definition for 'data'
    loadCytoband,DEMIExperiment-environment: no visible global function
     definition for 'data'
    loadPathway,DEMIExperiment-environment: no visible global function
     definition for 'data'
    Undefined global functions or variables:
     combn data dhyper median p.adjust t.test wilcox.test write.table
    Consider adding
     importFrom("stats", "dhyper", "median", "p.adjust", "t.test",
     "wilcox.test")
     importFrom("utils", "combn", "data", "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.1.2
Check: package dependencies
Result: ERROR
    Packages required but not available: 'affxparser', 'affy', 'oligo'
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64