CRAN Package Check Results for Package pheno

Last updated on 2019-08-22 22:47:01 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6 7.20 60.67 67.87 NOTE
r-devel-linux-x86_64-debian-gcc 1.6 6.98 47.90 54.88 NOTE
r-devel-linux-x86_64-fedora-clang 1.6 81.85 NOTE
r-devel-linux-x86_64-fedora-gcc 1.6 83.23 NOTE
r-devel-windows-ix86+x86_64 1.6 27.00 0.00 27.00 FAIL
r-patched-linux-x86_64 1.6 7.09 59.25 66.34 NOTE
r-patched-solaris-x86 1.6 137.60 NOTE
r-release-linux-x86_64 1.6 7.09 59.21 66.30 NOTE
r-release-windows-ix86+x86_64 1.6 24.00 128.00 152.00 NOTE
r-release-osx-x86_64 1.6 NOTE
r-oldrel-windows-ix86+x86_64 1.6 15.00 114.00 129.00 NOTE
r-oldrel-osx-x86_64 1.6 NOTE

Check Details

Version: 1.6
Check: R code for possible problems
Result: NOTE
    pheno.ddm: no visible global function definition for 'new'
    pheno.flm.fit: no visible binding for global variable 'na.exclude'
    pheno.flm.fit: no visible global function definition for 'terms'
    pheno.flm.fit: no visible global function definition for 'residuals'
    pheno.flm.fit: no visible global function definition for 'qt'
    pheno.lad.fit: no visible binding for global variable 'na.exclude'
    pheno.mlm.fit: no visible binding for global variable 'na.exclude'
    pheno.mlm.fit: no visible global function definition for 'residuals'
    Undefined global functions or variables:
     na.exclude new qt residuals terms
    Consider adding
     importFrom("methods", "new")
     importFrom("stats", "na.exclude", "qt", "residuals", "terms")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.6
Check: Rd line widths
Result: NOTE
    Rd file 'pheno.mlm.fit.Rd':
     \examples lines wider than 100 characters:
     R <- pheno.mlm.fit(DWD) # parameter estimation
     summary(tr)$coef[2] # slope of trend
     summary(tr)$coef[4] # standard error of trend
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.6
Check: compiled code
Result: NOTE
    File ‘pheno/libs/pheno.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.6
Check: package dependencies
Result: FAIL
    Check process probably crashed or hung up for 20 minutes ... killed
    Most likely this happened in the example checks (?),
    if not, ignore the following last lines of example output:
    
    ======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-devel-windows-ix86+x86_64