- Sync with CRAN

- added
`FindEnvironment`

function to find the environment of a selected variable - added
`ChangeNames`

function to change names, colnames or rownames of single items or a list of items - Updated
`ParseNumber`

function to optionally extract numeric values with decimals - @davidgohel adapted
`ParsePlot`

to conform with changes in`officer`

and`rvg`

packages

- Updated
`ParsePlot`

function to conform with changes in`rvg`

package: Part Deux

- Updated
`ParsePlot`

function to conform with changes in`rvg`

package - Fixed
`circlize`

function

- Fixed an sorting error in
`contrasts`

function

- Added the ability to use custom save names
- Removed the appended “Plot” in save names for
`ParsePlot`

function

- Fixed factor-to-numeric-bug
`metric`

function

- Added
`InverseHDI`

function to compute inverse cumulative density function of the distribution

- Added option to add results to
`ETA`

function

- Added
`PlotParam`

function to plot density of parameter values (including ROPE)

- Removed
`PlotData`

function. All plots are now called from seperate functions:`PlotCirclize`

to create a circlize plot`PlotMean`

to create a mean plot`PlotNominal`

to create a nominal plot`PlotParam`

to create a density plot with parameter values

- Small fix in
`SumMCMC`

function to compute sample sizes

- Updated
`CFA`

function to include correlation matrix - Added a option to run
`PPP`

for every kth length of MCMC chains (Default is every 10th)

- Optimized
`RunContrasts`

to allow larger MCMC simulations (2nd review)

- Fixed
`plot_data`

vignette - Updated
`README`

- Fixed title bug in
`circlize`

plots - Added
`RemoveGarbage`

function to clear up working memory - Added
`MultiGrep`

function to use multiple patterns to select an element from a vector - Fixed bug in
`kappa`

function - Fixed bug in
`covariate`

function - Fixed inline comment bug in
`TidyCode`

function - Added option to define which parameters to use for diagnostics
- Removed (some of the…) unnecessary arguments in
`bfw`

function - Added a
`apa`

PowerPoint template

- Added
`nominal`

and`circlize`

(using the`circlize`

package) plot types`mean`

plots are now seperated from main`PlotData`

function`ParsePlot`

and`PlotData`

functions are also seperated

- Fixed an error in
`nominal`

function

- Fixed variables namnes in
`nominal`

function when using only 1 variable

- Fixed issue of line break after HTML tags when rendering Rmd files.

- Fixed
`ParsePlot`

to accommodate ggplots.`PlotData`

now returns`ggplot2`

and not`grDevices::recordPlot()`

- Added a second badge, a more informative badge, ’cos why not.

- Some typos

- Added a badge because all the cool kids have them
- Fixed small inconsistencies in ParsePlot parameters (i.e., type png with layout pw).
- Defaults are now rasterized pdf on a4 layout with 12 pointsize.

- Optimized
`RunContrasts`

to allow larger MCMC simulations

- Optimized
`ParsePlot`

to handle large amounts of plots - Added
`png`

package to`Suggests`

to handle rasterized graphics for pdf/ps. - Created a small function called
`TidyCode`

to format messy code. - Modified
`nominal`

and`metric`

functions to use a single flexible jags model for each function respectively - Added an extended
`covariate function`

to include y and x variables. - Redefined fit
`data models`

- Created a separate model for confirmatory factor analysis using Wishart distribution
- Redefined structural equation models, making the models more efficient

- Added options to have more control over JAGS simulations
`jags.method`

, specify method for JAGS (e.g., parallel or simple)`jags.chains`

, specify specify number of chains for JAGS`adapt.steps`

, the number of adaptive iterations to use at the start of each simulation`burnin.steps`

, the number of burnin iterations, NOT including the adaptive iterations to use for the simulation.

- Added a small
`ETA`

function to display running time of functions - Made feedback from MCMC functions more informative
- Fixed
`custom model`

in`settings`

- Fixed
`job.title`

bug in covariate - Fixed NULL values in
`TrimSplit`

and`CapWords`

- Replaced robust estimates of R^2 with Spearman
- Moved vignettes from
`vignettes`

to`doc`

- Migrated from the orphaned
`ReporteRs`

to`officer`

(thanks to Professor Brian Ripley at University of Oxford for notifying me)- Added two PowerPoint templates
`legacy`

(4:3) and`widescreen`

(16:9)

- Added two PowerPoint templates
- The following packages are moved from
`Imports`

to`Suggests`

- ggplot2
- lavaan
- officer
- psych
- robust
- rvg
- scales
- truncnorm

- Modified title of package from
`Computational Modelling`

to`Computational Modeling`

to conform with US spelling - Recoded diagnostics, making the code more efficent.
- Correcting some typos and code aesthetics (e.g., replaced print with cat to display running time of analyses)
- Reviewed
`TrimSplit`

function to include removing empty elements from vector - Removed
`methods`

and`rJava`

from imports

- Initial launch with the following modules:
- Bernoulli trials
- Covariate estimations (including correlation and Cronbach`s alpha)
- Fit data (e.g., SEM, CFA, mediation models)
- Bayesian equivalent of Cohen`s kappa
- Mean and standard deviation estimations
- Predict metric values (cf., ANOVA)
- Predict nominal values (c.f., chi-square test)
- Simple, multiple and hierarchical regression
- Softmax regression (i.e., multinomial logistic regression)

- Added a
`NEWS.md`

file to track changes to the package. - Added a
`TODO.md`

file to track future work on the package. - Added a
`README.md`

file as an introduction to the package.