fastbeta: Fast Estimation of Time-Varying Infectious Disease Transmission Rates

Methods for estimating time-varying infectious disease transmission rates from disease incidence time series, based on discretizations of an SIR model, as analyzed in Jagan et al. (2020) <doi:10.1371/journal.pcbi.1008124>.

Version: 0.2.0
Depends: R (≥ 4.3.0)
Imports: adaptivetau, deSolve, graphics, stats
Suggests: grDevices, tools, utils
Published: 2023-12-11
Author: Mikael Jagan ORCID iD [aut, cre]
Maintainer: Mikael Jagan <jaganmn at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
Materials: NEWS
CRAN checks: fastbeta results


Reference manual: fastbeta.pdf


Package source: fastbeta_0.2.0.tar.gz
Windows binaries: r-prerel:, r-release:, r-oldrel:
macOS binaries: r-prerel (arm64): fastbeta_0.2.0.tgz, r-release (arm64): fastbeta_0.2.0.tgz, r-oldrel (arm64): fastbeta_0.1.0.tgz, r-prerel (x86_64): fastbeta_0.2.0.tgz, r-release (x86_64): fastbeta_0.2.0.tgz
Old sources: fastbeta archive


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