forImage: Foraminiferal Image Analysis and Test Measurement

The goal of this collection of functions is to provide an easy to use tool for the measurement of foraminifera and other unicellulars organisms size. With functions developed to guide foraminiferal test biovolume calculations and cell biomass estimations. The volume function includes several microalgae models geometric adaptations based on Hillebrand et al. (1999) <doi:10.1046/j.1529-8817.1999.3520403.x>, Sun and Liu (2003) <doi:10.1093/plankt/fbg096> and Vadrucci, Cabrini and Basset (2007) <doi:10.1285/i1825229Xv1n2p83>.

Version: 0.1.0
Depends: R (≥ 3.2.0)
Imports: dplyr, magrittr, tibble, reticulate
Suggests: knitr, rmarkdown, data.table, xml2, raster, testthat (≥ 2.1.0)
Published: 2021-03-02
Author: Thaise R Freitas [aut, cre], Eduardo Bacalhau [aut], Carla Bonetti [aut]
Maintainer: Thaise R Freitas <thaisericardo.freitas at gmail.com>
BugReports: https://github.com/ThaiseRF/forImage/issues
License: MIT + file LICENSE
URL: https://github.com/ThaiseRF/forImage
NeedsCompilation: no
SystemRequirements: Python >=3.5, numpy ( >= 1.18.1), imutils ( >= 0.5.3), scipy ( >= 1.4.1), pandas ( >= 1.0.2), Pillow ( >= 7.0.0), opencv ( >= 4.1.2)
Materials: README
CRAN checks: forImage results

Documentation:

Reference manual: forImage.pdf
Vignettes: Getting started with forImage R package

Downloads:

Package source: forImage_0.1.0.tar.gz
Windows binaries: r-devel: forImage_0.1.0.zip, r-release: forImage_0.1.0.zip, r-oldrel: forImage_0.1.0.zip
macOS binaries: r-release (arm64): forImage_0.1.0.tgz, r-release (x86_64): forImage_0.1.0.tgz, r-oldrel: forImage_0.1.0.tgz

Linking:

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