netmhc2pan: Interface to 'NetMHCIIpan'

The field of immunology benefits from software that can predict which peptide sequences trigger an immune response. 'NetMHCIIpan' is a such a tool: it predicts the binding strength of a short peptide to a Major Histocompatibility Complex class II (MHC-II) molecule. 'NetMHCIIpan' can be used from a web server at <> or from the command-line, using a local installation. This package allows to call 'NetMHCIIpan' from R.

Version: 1.3.1
Imports: assertive, devtools, dplyr, rappdirs, readr, seqinr, stringr, testit, tibble
Suggests: knitr, rmarkdown, testthat, spelling
Published: 2020-11-18
Author: Richèl J.C. Bilderbeek ORCID iD [aut, cre], Byungkuk Min [ctb]
Maintainer: Richèl J.C. Bilderbeek <richel at>
License: GPL-3
NeedsCompilation: no
SystemRequirements: NetMHC2pan (
Language: en-US
CRAN checks: netmhc2pan results


Reference manual: netmhc2pan.pdf
Vignettes: Demo
Package source: netmhc2pan_1.3.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): netmhc2pan_1.3.1.tgz, r-release (x86_64): netmhc2pan_1.3.1.tgz, r-oldrel: netmhc2pan_1.3.1.tgz


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